Journal: Nucleic Acids Research
Article Title: AgBase: supporting functional modeling in agricultural organisms
doi: 10.1093/nar/gkq1115
Figure Lengend Snippet: Publication of agricultural microarray data. On average, less than half of the agricultural microarray data sets submitted to the NCBI GEO database are published. These statistics are based upon gene expression data submitted to the NCBI GEO database. Records are shown for as at 9 September 2010. For each species the number of expression data sets linked to a PubMed record was used to determine the proportion of unpublished data sets. Note that this approach is likely to under-estimate the amount of unpublished data sets as it does not include data not submitted to this database.
Article Snippet: We worked directly with microarray users and developers to provide ID mapping and GO annotations for the FHCRC chicken 13K (GPL2863) and Equine Whole Genome Oligonucleotide microarrays ( ) and are currently working to provide the same data for the 15K Agilent Sheep Gene Expression microarray (019921).
Techniques: Microarray, Expressing